Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SUB0825 | SUB1584 | SUB0825 | SUB1584 | NAD-dependent malic enzyme. | Putative carboxylase subunit. | 0.918 |
SUB0825 | gcdB | SUB0825 | SUB1591 | NAD-dependent malic enzyme. | Putative Na+-transporting glutaconyl-CoA decarboxylase beta subunit; Tunnel subunit of the primary sodium pump glutaconyl-CoA decarboxylase (GCD). | 0.919 |
SUB0825 | ldh | SUB0825 | SUB0879 | NAD-dependent malic enzyme. | L-lactate dehydrogenase; Catalyzes the conversion of lactate to pyruvate. Belongs to the LDH/MDH superfamily. LDH family. | 0.942 |
SUB0825 | pdhA | SUB0825 | SUB1103 | NAD-dependent malic enzyme. | Putative pyruvate dehydrogenase E1 component, alpha subunit. | 0.925 |
SUB0825 | pdhB | SUB0825 | SUB1102 | NAD-dependent malic enzyme. | Putative pyruvate dehydrogenase E1 component, beta subunit. | 0.929 |
SUB0825 | pfl | SUB0825 | SUB1568 | NAD-dependent malic enzyme. | Formate acetyltransferase. | 0.922 |
SUB0825 | pflD | SUB0825 | SUB0160 | NAD-dependent malic enzyme. | Putative formate acetyltransferase. | 0.922 |
SUB0825 | ppdK | SUB0825 | SUB1519 | NAD-dependent malic enzyme. | Pyruvate, phosphate dikinase; Belongs to the PEP-utilizing enzyme family. | 0.926 |
SUB0825 | pyk | SUB0825 | SUB1000 | NAD-dependent malic enzyme. | Putative pyruvate kinase; Belongs to the pyruvate kinase family. | 0.950 |
SUB1584 | SUB0825 | SUB1584 | SUB0825 | Putative carboxylase subunit. | NAD-dependent malic enzyme. | 0.918 |
SUB1584 | gcdB | SUB1584 | SUB1591 | Putative carboxylase subunit. | Putative Na+-transporting glutaconyl-CoA decarboxylase beta subunit; Tunnel subunit of the primary sodium pump glutaconyl-CoA decarboxylase (GCD). | 0.973 |
SUB1584 | ldh | SUB1584 | SUB0879 | Putative carboxylase subunit. | L-lactate dehydrogenase; Catalyzes the conversion of lactate to pyruvate. Belongs to the LDH/MDH superfamily. LDH family. | 0.929 |
SUB1584 | pdhA | SUB1584 | SUB1103 | Putative carboxylase subunit. | Putative pyruvate dehydrogenase E1 component, alpha subunit. | 0.918 |
SUB1584 | pdhB | SUB1584 | SUB1102 | Putative carboxylase subunit. | Putative pyruvate dehydrogenase E1 component, beta subunit. | 0.912 |
SUB1584 | pfl | SUB1584 | SUB1568 | Putative carboxylase subunit. | Formate acetyltransferase. | 0.908 |
SUB1584 | pflD | SUB1584 | SUB0160 | Putative carboxylase subunit. | Putative formate acetyltransferase. | 0.908 |
SUB1584 | ppdK | SUB1584 | SUB1519 | Putative carboxylase subunit. | Pyruvate, phosphate dikinase; Belongs to the PEP-utilizing enzyme family. | 0.923 |
SUB1584 | pyk | SUB1584 | SUB1000 | Putative carboxylase subunit. | Putative pyruvate kinase; Belongs to the pyruvate kinase family. | 0.925 |
gcdB | SUB0825 | SUB1591 | SUB0825 | Putative Na+-transporting glutaconyl-CoA decarboxylase beta subunit; Tunnel subunit of the primary sodium pump glutaconyl-CoA decarboxylase (GCD). | NAD-dependent malic enzyme. | 0.919 |
gcdB | SUB1584 | SUB1591 | SUB1584 | Putative Na+-transporting glutaconyl-CoA decarboxylase beta subunit; Tunnel subunit of the primary sodium pump glutaconyl-CoA decarboxylase (GCD). | Putative carboxylase subunit. | 0.973 |
page 1 of 5