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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lmbLaminin binding protein; Belongs to the bacterial solute-binding protein 9 family. (309 aa)    
Predicted Functional Partners:
SUB0111
ABC transporter ATP-binding protein.
 
 
 0.989
SUB0112
ABC transporter permease protein.
 
 
 0.981
adcA
Zinc-binding protein AdcA precursor; Belongs to the bacterial solute-binding protein 9 family.
 
 
 
0.981
mtsC
Metal cation ABC transporter membrane protein.
 
  
 0.889
mtsB
Metal cation ABC transporter ATP-binding protein.
 
  
 0.866
SUB0885
Streptococcal histidine triad protein.
     
 0.799
SUB0110
MarR-family regulatory protein.
  
  
 0.702
scpB
Segregation and condensation protein B; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves.
      
 0.581
scpA-2
C5A peptidase precursor.
   
  
 0.502
SUB0883
Putative exported protein.
       0.485
Your Current Organism:
Streptococcus uberis
NCBI taxonomy Id: 218495
Other names: S. uberis 0140J, Streptococcus uberis 0140J, Streptococcus uberis str. 0140J
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.