Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
lmbLaminin binding protein; Belongs to the bacterial solute-binding protein 9 family. (309 aa)    
Predicted Functional Partners:
SUB0111
ABC transporter ATP-binding protein.
 
 
 0.998
adcA
Zinc-binding protein AdcA precursor; Belongs to the bacterial solute-binding protein 9 family.
 
 
0.997
SUB0112
ABC transporter permease protein.
 
 
 0.989
SUB0110
MarR-family regulatory protein.
  
  
 0.979
mtsC
Metal cation ABC transporter membrane protein.
 
  
 0.883
mtsB
Metal cation ABC transporter ATP-binding protein.
 
  
 0.870
SUB0885
Streptococcal histidine triad protein.
     
 0.822
fbpS
Fibronectin/fibrinogen-binding protein.
      
 0.793
scpB
Segregation and condensation protein B; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves.
      
 0.736
rpsN
30S ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site.
  
  
 0.567
Your Current Organism:
Streptococcus uberis
NCBI taxonomy Id: 218495
Other names: S. uberis 0140J, Streptococcus uberis 0140J, Streptococcus uberis str. 0140J
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