Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
SUB0900Putative oxidoreductase. (338 aa)    
Predicted Functional Partners:
SUB0901
Conserved hypothetical protein.
       0.545
SUB0172
Oxidoreductase family protein.
  
     0.514
SUB0896
Hypothetical protein.
       0.508
SUB0897
Hypothetical protein.
       0.498
SUB0898
impB/mucB/samB family; Belongs to the DNA polymerase type-Y family.
       0.493
SUB0899
Putative phage repressor-like protein.
       0.493
lysS
lysyl-tRNA synthetase; Belongs to the class-II aminoacyl-tRNA synthetase family.
  
    0.455
SUB0903
Putative 2,5-diketo-D-gluconic acid reductase.
  
  
 0.422
SUB1770
Putative oxidoreductase.
  
     0.409
Your Current Organism:
Streptococcus uberis
NCBI taxonomy Id: 218495
Other names: S. uberis 0140J, Streptococcus uberis 0140J, Streptococcus uberis str. 0140J
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