Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SUB0427 | cysM | SUB0427 | SUB1379 | Putative aminotransferase. | Putative cysteine synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family. | 0.930 |
SUB0427 | dpfB | SUB0427 | SUB0943 | Putative aminotransferase. | Putative pantothenate metabolism flavoprotein. | 0.803 |
SUB0945 | birA | SUB0945 | SUB1213 | Putative membrane protein. | BirA bifunctional protein [includes: biotin operon repressor; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family. | 0.519 |
SUB0945 | coaC | SUB0945 | SUB0944 | Putative membrane protein. | Putative phosphopantothenoylcysteine decarboxylase. | 0.633 |
SUB0945 | dpfB | SUB0945 | SUB0943 | Putative membrane protein. | Putative pantothenate metabolism flavoprotein. | 0.680 |
SUB0945 | fhs1 | SUB0945 | SUB0942 | Putative membrane protein. | Formate--tetrahydrofolate ligase 1; Belongs to the formate--tetrahydrofolate ligase family. | 0.444 |
SUB0945 | pgmA | SUB0945 | SUB0946 | Putative membrane protein. | Putative phosphomannomutase. | 0.542 |
SUB1683 | coaC | SUB1683 | SUB0944 | Deoxyuridine 5'-triphosphate nucleotidohydrolase; This enzyme is involved in nucleotide metabolism: it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA. | Putative phosphopantothenoylcysteine decarboxylase. | 0.514 |
SUB1683 | dpfB | SUB1683 | SUB0943 | Deoxyuridine 5'-triphosphate nucleotidohydrolase; This enzyme is involved in nucleotide metabolism: it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA. | Putative pantothenate metabolism flavoprotein. | 0.514 |
birA | SUB0945 | SUB1213 | SUB0945 | BirA bifunctional protein [includes: biotin operon repressor; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family. | Putative membrane protein. | 0.519 |
birA | coaA | SUB1213 | SUB0955 | BirA bifunctional protein [includes: biotin operon repressor; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family. | Pantothenate kinase. | 0.535 |
birA | coaC | SUB1213 | SUB0944 | BirA bifunctional protein [includes: biotin operon repressor; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family. | Putative phosphopantothenoylcysteine decarboxylase. | 0.450 |
birA | dpfB | SUB1213 | SUB0943 | BirA bifunctional protein [includes: biotin operon repressor; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family. | Putative pantothenate metabolism flavoprotein. | 0.532 |
coaA | birA | SUB0955 | SUB1213 | Pantothenate kinase. | BirA bifunctional protein [includes: biotin operon repressor; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family. | 0.535 |
coaA | coaC | SUB0955 | SUB0944 | Pantothenate kinase. | Putative phosphopantothenoylcysteine decarboxylase. | 0.916 |
coaA | dpfB | SUB0955 | SUB0943 | Pantothenate kinase. | Putative pantothenate metabolism flavoprotein. | 0.918 |
coaC | SUB0945 | SUB0944 | SUB0945 | Putative phosphopantothenoylcysteine decarboxylase. | Putative membrane protein. | 0.633 |
coaC | SUB1683 | SUB0944 | SUB1683 | Putative phosphopantothenoylcysteine decarboxylase. | Deoxyuridine 5'-triphosphate nucleotidohydrolase; This enzyme is involved in nucleotide metabolism: it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA. | 0.514 |
coaC | birA | SUB0944 | SUB1213 | Putative phosphopantothenoylcysteine decarboxylase. | BirA bifunctional protein [includes: biotin operon repressor; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family. | 0.450 |
coaC | coaA | SUB0944 | SUB0955 | Putative phosphopantothenoylcysteine decarboxylase. | Pantothenate kinase. | 0.916 |
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