Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SUB0973Conserved hypothetical protein. (198 aa)    
Predicted Functional Partners:
SUB0279
Type I restriction-modification system M protein.
  
 
 0.982
SUB0972
Putative membrane protein.
       0.814
SUB0150
Conserved hypothetical protein.
  
     0.762
SUB0282
Type I restriction-modification system S protein (pseudogene); Subunit R is required for both nuclease and ATPase activities, but not for modification.
  
  
 0.749
SUB1635
Putative membrane anchored protein.
 
     0.742
SUB0971
Conserved hypothetical protein.
  
    0.716
SUB1737
Putative exported protein.
  
     0.696
SUB0700
Rhamnan synthesis protein F family protein.
  
     0.691
mecA
Adapter protein MecA; Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis.
  
     0.674
xerD
Tyrosine recombinase XerD; Putative tyrosine recombinase. Not involved in the cutting and rejoining of the recombining DNA molecules on dif(SL) site. Belongs to the 'phage' integrase family. XerD-like subfamily.
 
   
 0.671
Your Current Organism:
Streptococcus uberis
NCBI taxonomy Id: 218495
Other names: S. uberis 0140J, Streptococcus uberis 0140J, Streptococcus uberis str. 0140J
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