STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SUB0975ABC transporter ATP-binding protein. (233 aa)    
Predicted Functional Partners:
SUB0974
ABC transporter permease protein.
 
 
 0.999
SUB0738
Putative permease.
 
 0.961
SUB0976
TetR family regulatory protein.
  
 
 0.635
SUB0918
Putative transporter permease protein.
  
 
 0.606
SUB0205
Permease protein.
  
 
 0.605
SUB0682
Putative permease.
  
 
 0.605
SUB0296
ABC transporter, ATP-binding protein.
 
  
 0.598
SUB0736
Putative exported protein.
  
 
 0.555
SUB0972
Putative membrane protein.
       0.519
SUB0973
Conserved hypothetical protein.
       0.514
Your Current Organism:
Streptococcus uberis
NCBI taxonomy Id: 218495
Other names: S. uberis 0140J, Streptococcus uberis 0140J, Streptococcus uberis str. 0140J
Server load: medium (44%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.