Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
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[Homology]
Score
SUB0976TetR family regulatory protein. (182 aa)    
Predicted Functional Partners:
SUB0974
ABC transporter permease protein.
 
  
 0.780
SUB0975
ABC transporter ATP-binding protein.
   
 
 0.729
pbp2A
Penicillin-binding protein 2a.
      
 0.522
purE
Putative phosphoribosylaminoimidazole carboxylase catalytic subunit; Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR).
      
 0.513
purD
Phosphoribosylamine-glycine ligase; Belongs to the GARS family.
      
 0.494
SUB1577
Putative DNA-binding protein.
  
   
 0.466
pth
peptidyl-tRNA hydrolase; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. Belongs to the PTH family.
  
    0.459
SUB0971
Conserved hypothetical protein.
 
     0.423
SUB0004
Putative DNA-binding protein.
  
   
 0.422
thiN
Putative thiamin pyrophosphokinase.
  
     0.411
Your Current Organism:
Streptococcus uberis
NCBI taxonomy Id: 218495
Other names: S. uberis 0140J, Streptococcus uberis 0140J, Streptococcus uberis str. 0140J
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