Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
SUB0978GntR family regulatory protein. (214 aa)    
Predicted Functional Partners:
SUB1717
Putative glycine-betaine binding permease protein.
 
   
 0.872
SUB0979
Conserved hypothetical protein.
       0.682
SUB1718
Putative glycine betaine transport ATP-binding protein.
 
   
 0.645
SUB0980
CsbD-like protein; Belongs to the UPF0337 (CsbD) family.
       0.619
tpx
Putative thiol peroxidase; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. Tpx subfamily.
       0.601
SUB1628
Putative membrane protein.
  
     0.555
SUB0981
Conserved hypothetical protein.
       0.522
SUB0983
Putative membrane protein.
 
     0.493
SUB1005
Putative membrane protein.
  
     0.465
SUB0982
Putative membrane protein.
 
     0.454
Your Current Organism:
Streptococcus uberis
NCBI taxonomy Id: 218495
Other names: S. uberis 0140J, Streptococcus uberis 0140J, Streptococcus uberis str. 0140J
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