STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SUB0979Conserved hypothetical protein. (162 aa)    
Predicted Functional Partners:
SUB0983
Putative membrane protein.
 
   
 0.882
SUB0980
CsbD-like protein; Belongs to the UPF0337 (CsbD) family.
     
 0.801
SUB0982
Putative membrane protein.
 
     0.765
SUB0981
Conserved hypothetical protein.
 
    
0.690
SUB0984
Putative membrane protein.
 
  
 0.544
SUB0978
GntR family regulatory protein.
       0.540
SUB0985
Putative membrane protein.
 
  
 0.490
Your Current Organism:
Streptococcus uberis
NCBI taxonomy Id: 218495
Other names: S. uberis 0140J, Streptococcus uberis 0140J, Streptococcus uberis str. 0140J
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.