Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
SUB0979Conserved hypothetical protein. (162 aa)    
Predicted Functional Partners:
SUB0983
Putative membrane protein.
 
   
 0.916
SUB0982
Putative membrane protein.
 
     0.837
SUB0980
CsbD-like protein; Belongs to the UPF0337 (CsbD) family.
     
 0.834
SUB0981
Conserved hypothetical protein.
 
    
0.774
SUB0978
GntR family regulatory protein.
       0.682
SUB0984
Putative membrane protein.
 
    0.551
SUB0985
Putative membrane protein.
 
    0.498
tpx
Putative thiol peroxidase; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. Tpx subfamily.
       0.414
SUB0333
Conserved hypothetical protein; Possible alternative translational start site after codons 7 and 11.
  
  
 0.402
Your Current Organism:
Streptococcus uberis
NCBI taxonomy Id: 218495
Other names: S. uberis 0140J, Streptococcus uberis 0140J, Streptococcus uberis str. 0140J
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