Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SUB0983Putative membrane protein. (193 aa)    
Predicted Functional Partners:
SUB0982
Putative membrane protein.
 
   
 0.967
SUB0979
Conserved hypothetical protein.
 
   
 0.916
SUB0981
Conserved hypothetical protein.
 
   
 0.914
SUB0980
CsbD-like protein; Belongs to the UPF0337 (CsbD) family.
     
 0.780
SUB0984
Putative membrane protein.
 
     0.701
SUB1241
Putative lipoprotein.
  
     0.655
SUB0985
Putative membrane protein.
 
     0.601
SUB1169
Acetyltransferase (GNAT) family protein.
  
     0.583
SUB0012
Putative exported protein.
  
     0.543
SUB0048
Putative amidase.
  
     0.535
Your Current Organism:
Streptococcus uberis
NCBI taxonomy Id: 218495
Other names: S. uberis 0140J, Streptococcus uberis 0140J, Streptococcus uberis str. 0140J
Server load: low (34%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.