Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
SUB0990Putative amino acid ABC transporter, extracellular amino acid-binding protein. (277 aa)    
Predicted Functional Partners:
SUB0992
Putative amino acid ABC transporter permease protein.
 0.999
SUB0991
Putative amino acid ABC transporter ATP-binding protein.
 
 0.992
SUB1279
Putative amino acid ABC transporter permease protein.
 
 0.933
SUB0549
Putative amino acid ABC transporter, permease protein.
 
 0.925
SUB1018
Transport system membrane protein.
 
 0.922
SUB0548
Putative amino acid ABC transporter, permease protein.
 
 0.916
SUB1415
ABC transporter permease protein.
 
 0.866
glnQ1
Putative glutamine ABC transporter, ATP-binding protein 1; Similar to SUB1278, 61.066% identity (61.066% ungapped) in 244 aa overlap (1-244:1-244); and SUB0336, 54.694% identity (54.918% ungapped) in 245 aa overlap (1-244:1-245); and SUB0551, 51.653% identity (52.083% ungapped) in 242 aa overlap (6-245:4-245).
 
 
 0.825
glnQ3
Putative glutamine transporter, ATP-binding protein 3; Similar to SUB1153, 61.066% identity (61.066% ungapped) in 244 aa overlap (1-244:1-244); and SUB0336, 59.592% identity (59.836% ungapped) in 245 aa overlap (1-244:1-245); and SUB0551, 53.719% identity (54.167% ungapped) in 242 aa overlap (5-244:3-244); and SUB1414, 50.207% identity (50.840% ungapped) in 241 aa overlap (5-242:1-241).
 
 
 0.777
glnQ2
Putative glutamine ABC transporter, ATP-binding protein 2; Similar to SUB1278, 59.592% identity (59.836% ungapped) in 245 aa overlap (1-245:1-244); and SUB1153, 54.694% identity (54.918% ungapped) in 245 aa overlap (1-245:1-244); and SUB1414, 50.607% identity (52.301% ungapped) in 247 aa overlap (5-246:1-244).
 
 
 0.754
Your Current Organism:
Streptococcus uberis
NCBI taxonomy Id: 218495
Other names: S. uberis 0140J, Streptococcus uberis 0140J, Streptococcus uberis str. 0140J
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