Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
SUB1006Putative membrane protein. (203 aa)    
Predicted Functional Partners:
SUB0538
Putative glycosyltransferase.
 
  
 0.739
SUB1283
Conserved hypothetical protein.
  
     0.639
SUB1380
Putative S1 RNA binding domain protein.
     
 0.538
SUB0754
Conserved hypothetical protein.
  
     0.503
SUB1384
Putative membrane protein.
 
     0.480
SUB0539
Putative glycosyltransferase.
 
  
 0.473
SUB0851
Adenylate cyclase family protein.
  
     0.416
SUB0337
Glutamine ABC transporter, glutamine-binding protein/permease protein.
 
     0.401
Your Current Organism:
Streptococcus uberis
NCBI taxonomy Id: 218495
Other names: S. uberis 0140J, Streptococcus uberis 0140J, Streptococcus uberis str. 0140J
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