Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
SUB1018Transport system membrane protein. (219 aa)    
Predicted Functional Partners:
SUB1019
Extracellular solute-binding protein; Belongs to the bacterial solute-binding protein 3 family.
 0.997
SUB0638
Putative extracellular amino acid-binding protein; Similar to SUB0688, 59.245% identity (59.470% ungapped) in 265 aa overlap (1-264:1-265).
 
 0.984
SUB0365
Extracellular solute-binding protein.
 0.981
SUB1414
ABC transporter ATP-binding protein; Similar to SUB1278, 50.207% identity (50.840% ungapped) in 241 aa overlap (1-241:5-242); and SUB0336, 50.607% identity (52.301% ungapped) in 247 aa overlap (1-244:5-246).
 0.976
SUB1416
Extracellular solute-binding protein.
 0.949
SUB0990
Putative amino acid ABC transporter, extracellular amino acid-binding protein.
 
 0.922
SUB1415
ABC transporter permease protein.
  
  
 
0.915
glnQ1
Putative glutamine ABC transporter, ATP-binding protein 1; Similar to SUB1278, 61.066% identity (61.066% ungapped) in 244 aa overlap (1-244:1-244); and SUB0336, 54.694% identity (54.918% ungapped) in 245 aa overlap (1-244:1-245); and SUB0551, 51.653% identity (52.083% ungapped) in 242 aa overlap (6-245:4-245).
 
 0.908
SUB0688
Extracellular solute-binding protein; Similar to SUB0638, 59.245% identity (59.470% ungapped) in 265 aa overlap (1-265:1-264).
 
 0.896
glnQ3
Putative glutamine transporter, ATP-binding protein 3; Similar to SUB1153, 61.066% identity (61.066% ungapped) in 244 aa overlap (1-244:1-244); and SUB0336, 59.592% identity (59.836% ungapped) in 245 aa overlap (1-244:1-245); and SUB0551, 53.719% identity (54.167% ungapped) in 242 aa overlap (5-244:3-244); and SUB1414, 50.207% identity (50.840% ungapped) in 241 aa overlap (5-242:1-241).
 
 0.892
Your Current Organism:
Streptococcus uberis
NCBI taxonomy Id: 218495
Other names: S. uberis 0140J, Streptococcus uberis 0140J, Streptococcus uberis str. 0140J
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