Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SUB1028 | SUB1030 | SUB1028 | SUB1030 | Putative nucleotide sugar epimerase. | Putative acetyltransferase. | 0.804 |
SUB1028 | SUB1031 | SUB1028 | SUB1031 | Putative nucleotide sugar epimerase. | Putative exopolysaccharide biosynthesis protein. | 0.818 |
SUB1028 | SUB1032 | SUB1028 | SUB1032 | Putative nucleotide sugar epimerase. | Hypothetical protein. | 0.819 |
SUB1028 | SUB1033 | SUB1028 | SUB1033 | Putative nucleotide sugar epimerase. | Putative membrane protein. | 0.759 |
SUB1028 | SUB1036 | SUB1028 | SUB1036 | Putative nucleotide sugar epimerase. | Putative galacturonic acid acetylase (fragment); Probable gene remnant. Similar to an internal region of Streptococcus pneumoniae Cap1F galacturonic acid acetylase UniProt:P96477_STRPN (EMBL:SPZ83335) (183 aa) fasta scores: E()=1e-06, 38.889% id in 72 aa. | 0.775 |
SUB1028 | SUB1037 | SUB1028 | SUB1037 | Putative nucleotide sugar epimerase. | Putative UDP-glucose 4-epimerase. | 0.546 |
SUB1028 | hasB1 | SUB1028 | SUB1696 | Putative nucleotide sugar epimerase. | UDP-glucose 6-dehydrogenase 1; Similar to SUB1027, 58.293% identity (59.900% ungapped) in 410 aa overlap (2-401:3-411). | 0.949 |
SUB1028 | hasB2 | SUB1028 | SUB1027 | Putative nucleotide sugar epimerase. | UDP-glucose 6-dehydrogenase 2; Similar to SUB1696, 58.293% identity (59.900% ungapped) in 410 aa overlap (3-411:2-401). | 0.988 |
SUB1028 | hasC | SUB1028 | SUB1692 | Putative nucleotide sugar epimerase. | UTP--glucose-1-phosphate uridylyltransferase. | 0.846 |
SUB1028 | mnaA | SUB1028 | SUB1029 | Putative nucleotide sugar epimerase. | UDP-N-acetylglucosamine 2-epimerase; Belongs to the UDP-N-acetylglucosamine 2-epimerase family. | 0.830 |
SUB1030 | SUB1028 | SUB1030 | SUB1028 | Putative acetyltransferase. | Putative nucleotide sugar epimerase. | 0.804 |
SUB1030 | SUB1031 | SUB1030 | SUB1031 | Putative acetyltransferase. | Putative exopolysaccharide biosynthesis protein. | 0.822 |
SUB1030 | SUB1032 | SUB1030 | SUB1032 | Putative acetyltransferase. | Hypothetical protein. | 0.780 |
SUB1030 | SUB1033 | SUB1030 | SUB1033 | Putative acetyltransferase. | Putative membrane protein. | 0.761 |
SUB1030 | SUB1036 | SUB1030 | SUB1036 | Putative acetyltransferase. | Putative galacturonic acid acetylase (fragment); Probable gene remnant. Similar to an internal region of Streptococcus pneumoniae Cap1F galacturonic acid acetylase UniProt:P96477_STRPN (EMBL:SPZ83335) (183 aa) fasta scores: E()=1e-06, 38.889% id in 72 aa. | 0.420 |
SUB1030 | SUB1037 | SUB1030 | SUB1037 | Putative acetyltransferase. | Putative UDP-glucose 4-epimerase. | 0.442 |
SUB1030 | hasB2 | SUB1030 | SUB1027 | Putative acetyltransferase. | UDP-glucose 6-dehydrogenase 2; Similar to SUB1696, 58.293% identity (59.900% ungapped) in 410 aa overlap (3-411:2-401). | 0.784 |
SUB1030 | mnaA | SUB1030 | SUB1029 | Putative acetyltransferase. | UDP-N-acetylglucosamine 2-epimerase; Belongs to the UDP-N-acetylglucosamine 2-epimerase family. | 0.836 |
SUB1031 | SUB1028 | SUB1031 | SUB1028 | Putative exopolysaccharide biosynthesis protein. | Putative nucleotide sugar epimerase. | 0.818 |
SUB1031 | SUB1030 | SUB1031 | SUB1030 | Putative exopolysaccharide biosynthesis protein. | Putative acetyltransferase. | 0.822 |
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