Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
SUB1038Putative glycosyl-1-phosphate-transferase. (200 aa)    
Predicted Functional Partners:
SUB1037
Putative UDP-glucose 4-epimerase.
  
 0.990
SUB1036
Putative galacturonic acid acetylase (fragment); Probable gene remnant. Similar to an internal region of Streptococcus pneumoniae Cap1F galacturonic acid acetylase UniProt:P96477_STRPN (EMBL:SPZ83335) (183 aa) fasta scores: E()=1e-06, 38.889% id in 72 aa.
  
 0.985
SUB1039
Polysaccharide biosynthesis protein.
 
  
 0.973
wze
Tyrosine-protein kinase Wze.
 
  
 0.965
SUB1041
Putative chain length determinant protein.
 
  
 0.960
wzh
Protein-tyrosine phosphatase Wzh.
 
  
 0.926
SUB1031
Putative exopolysaccharide biosynthesis protein.
  
  
 0.765
SUB1784
Putative exported protein; CDS contains coiled-coiled domains, residues 45 to 140.
  
  
 0.744
wzg
Integral membrane regulatory protein Wzg.
     
 0.730
SUB0696
Putative glycosyltransferase.
 
  
 0.654
Your Current Organism:
Streptococcus uberis
NCBI taxonomy Id: 218495
Other names: S. uberis 0140J, Streptococcus uberis 0140J, Streptococcus uberis str. 0140J
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