Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SUB1072Aldo/keto reductase family protein. (328 aa)    
Predicted Functional Partners:
SUB1075
MerR family regulatory protein.
 
    0.756
SUB1076
Putative zinc-binding alcohol dehydrogenase; Similar to SUB0101, 55.714% identity (56.686% ungapped) in 350 aa overlap (1-346:1-348).
  
  
 0.733
SUB1073
Carboxymuconolactone decarboxylase family protein.
     
 0.731
SUB1074
Conserved hypothetical protein.
       0.696
SUB1077
Putative short chain dehydrogenase; Possible alternative translational start site after codon 6.
 
 
 0.630
SUB1078
Aldo/keto reductase family.
  
 
0.592
SUB1071
Putative membrane protein.
       0.564
SUB1070
Putative lipase; Q8VQP2_BACSH.
 
  
 0.518
SUB0903
Putative 2,5-diketo-D-gluconic acid reductase.
  
 
 0.428
SUB1066
Putative membrane protein (pseudogene); Similar to Haemophilus influenzae hypothetical protein HI0886 UniProt:Y886_HAEIN (EMBL:HI32770) (134 aa) fasta scores: E()=6.6e-13, 42.857% id in 133 aa. CDS contains a nonsense mutation (opal) after codon 75.
  
 
 0.428
Your Current Organism:
Streptococcus uberis
NCBI taxonomy Id: 218495
Other names: S. uberis 0140J, Streptococcus uberis 0140J, Streptococcus uberis str. 0140J
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.