Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
SUB1198Glycosyl hydrolase family protein. (596 aa)    
Predicted Functional Partners:
SUB1197
Glycosyl hydrolase family protein.
 
  
 
0.977
SUB1199
Haloacid dehalogenase-like hydrolase.
   
 0.972
SUB1570
Putative beta-lactamase.
  
 0.776
kduD
Putative 2-deoxy-D-gluconate 3-dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
   
 0.639
SUB1195
Putative DNA-binding protein.
       0.555
SUB1193
Ribonuclease BN-like family protein.
 
     0.549
SUB0236
Putative glucose-specific phosphotransferase system (PTS), IIABC component.
 
  
 0.530
uxuA
Putative mannonate dehydratase; Catalyzes the dehydration of D-mannonate; Belongs to the mannonate dehydratase family.
 
     0.493
map
Putative metallopeptidase; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed; Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily.
       0.492
SUB1200
Putative beta-glucuronidase; Weakly similar to Scutellaria baicalensis (Baical skullcap) beta-glucuronidase SguG UniProt:Q9LRC8_SCUBA (EMBL:AB040072) (527 aa) fasta scores: E()=3.1e-09, 23.617% id in 470 aa.
       0.488
Your Current Organism:
Streptococcus uberis
NCBI taxonomy Id: 218495
Other names: S. uberis 0140J, Streptococcus uberis 0140J, Streptococcus uberis str. 0140J
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