STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
uidAPutative beta-glucuronidase; Belongs to the glycosyl hydrolase 2 family. (596 aa)    
Predicted Functional Partners:
uxaC
Uronate isomerase.
 
 
 0.988
uxuA
Putative mannonate dehydratase; Catalyzes the dehydration of D-mannonate; Belongs to the mannonate dehydratase family.
 
  
 0.886
SUB1207
PfkB family carbohydrate kinase.
 
  
 0.856
SUB1722
L-ribulose 5-phosphate 4-epimerase.
  
 
 0.819
kduD
Putative 2-deoxy-D-gluconate 3-dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
  
 0.693
SUB1205
GntR family regulatory protein.
     
 0.686
SUB1458
Sugar phosphotransferase system (PTS), galactitol-specific family, IIC component.
  
  
 0.649
SUB1654
Conserved hypothetical protein; CDS is extended at the C-terminus in comparison to orthologues.
   
 
 0.594
SUB0042
Putative beta-galactosidase precursor; Belongs to the glycosyl hydrolase 35 family.
 
 0.564
scrA
Putative sucrose-specific phosphotransferase system (PTS), IIABC component.
 
  
 0.537
Your Current Organism:
Streptococcus uberis
NCBI taxonomy Id: 218495
Other names: S. uberis 0140J, Streptococcus uberis 0140J, Streptococcus uberis str. 0140J
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.