STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
comEAPutative competence protein. (226 aa)    
Predicted Functional Partners:
comEC
Putative competence protein.
 
  
 0.974
SUB0118
Putative competence protein.
 
  
 0.895
comFA
Putative late competence protein.
   
  
 0.872
comYC
Putative competence protein.
   
  
 0.808
SUB0119
Putative competence protein.
  
  
 0.799
SUB1246
Putative acyltransferase.
       0.743
SUB1549
Putative cytidine and deoxycytidylate deaminase.
  
  
 0.721
SUB1243
Putative DNA polymerase III delta subunit.
     
 0.717
comX
Putative competence-specific global transcription modulator.
   
  
 0.702
SUB1300
Type IV leader peptidase family protein.
   
  
 0.699
Your Current Organism:
Streptococcus uberis
NCBI taxonomy Id: 218495
Other names: S. uberis 0140J, Streptococcus uberis 0140J, Streptococcus uberis str. 0140J
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.