STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SUB1280Conserved hypothetical protein. (76 aa)    
Predicted Functional Partners:
SUB1472
Phosphotransferase enzyme family protein.
  
     0.584
glnQ3
Putative glutamine transporter, ATP-binding protein 3; Similar to SUB1153, 61.066% identity (61.066% ungapped) in 244 aa overlap (1-244:1-244); and SUB0336, 59.592% identity (59.836% ungapped) in 245 aa overlap (1-244:1-245); and SUB0551, 53.719% identity (54.167% ungapped) in 242 aa overlap (5-244:3-244); and SUB1414, 50.207% identity (50.840% ungapped) in 241 aa overlap (5-242:1-241).
       0.558
SUB1279
Putative amino acid ABC transporter permease protein.
       0.558
SUB1135
Putative exported protein.
  
     0.553
clpE
Putative ATP-dependent Clp protease ATP-binding subunit; Belongs to the ClpA/ClpB family.
       0.516
SUB1283
Conserved hypothetical protein.
 
     0.490
SUB0396
Conserved hypothetical protein.
  
     0.476
SUB0848
Conserved hypothetical protein.
  
     0.469
SUB1866
Putative membrane protein.
  
     0.456
folD
Methenyltetrahydrofolate cyclohydrolase; Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate.
       0.433
Your Current Organism:
Streptococcus uberis
NCBI taxonomy Id: 218495
Other names: S. uberis 0140J, Streptococcus uberis 0140J, Streptococcus uberis str. 0140J
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.