Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
SUB1280Conserved hypothetical protein. (76 aa)    
Predicted Functional Partners:
glnQ3
Putative glutamine transporter, ATP-binding protein 3; Similar to SUB1153, 61.066% identity (61.066% ungapped) in 244 aa overlap (1-244:1-244); and SUB0336, 59.592% identity (59.836% ungapped) in 245 aa overlap (1-244:1-245); and SUB0551, 53.719% identity (54.167% ungapped) in 242 aa overlap (5-244:3-244); and SUB1414, 50.207% identity (50.840% ungapped) in 241 aa overlap (5-242:1-241).
       0.693
SUB1279
Putative amino acid ABC transporter permease protein.
       0.693
clpE
Putative ATP-dependent Clp protease ATP-binding subunit; Belongs to the ClpA/ClpB family.
       0.666
SUB1283
Conserved hypothetical protein.
 
     0.643
folD
Methenyltetrahydrofolate cyclohydrolase; Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate.
       0.615
SUB1282
Mut/NUDIX family protein; Belongs to the Nudix hydrolase family.
       0.590
SUB1472
Phosphotransferase enzyme family protein.
  
     0.584
SUB1135
Putative exported protein.
  
     0.553
SUB0396
Conserved hypothetical protein.
  
     0.476
SUB0848
Conserved hypothetical protein.
  
     0.469
Your Current Organism:
Streptococcus uberis
NCBI taxonomy Id: 218495
Other names: S. uberis 0140J, Streptococcus uberis 0140J, Streptococcus uberis str. 0140J
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