Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SUB1283Conserved hypothetical protein. (103 aa)    
Predicted Functional Partners:
SUB1282
Mut/NUDIX family protein; Belongs to the Nudix hydrolase family.
 
     0.840
SUB1280
Conserved hypothetical protein.
 
     0.643
SUB1006
Putative membrane protein.
  
     0.639
clpE
Putative ATP-dependent Clp protease ATP-binding subunit; Belongs to the ClpA/ClpB family.
       0.639
SUB0739
Putative membrane protein.
  
     0.627
SUB1384
Putative membrane protein.
  
     0.608
malX
Putative maltose/maltodextrin-binding protein precursor.
  
     0.600
SUB1583
Conserved hypothetical protein.
  
     0.578
SUB1368
Putative esterase.
  
     0.577
SUB0337
Glutamine ABC transporter, glutamine-binding protein/permease protein.
  
     0.574
Your Current Organism:
Streptococcus uberis
NCBI taxonomy Id: 218495
Other names: S. uberis 0140J, Streptococcus uberis 0140J, Streptococcus uberis str. 0140J
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