Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
glkAGlucokinase. (323 aa)    
Predicted Functional Partners:
pgmA
Putative phosphomannomutase.
 
 
 0.974
pgi
Glucose-6-phosphate isomerase; Belongs to the GPI family.
 
 
 0.968
SUB0198
Putative beta-glucosidase; Belongs to the glycosyl hydrolase 1 family.
  
 
 0.908
SUB0200
Similar to SUB0841, 50.535% identity (50.972% ungapped) in 467 aa overlap (7-471:6-470); and SUB0905, 49.465% identity (49.677% ungapped) in 467 aa overlap (7-471:8-474); and SUB0309, 47.689% identity (49.241% ungapped) in 476 aa overlap (7-469:4-477); and SUB0837, 47.390% identity (49.348% ungapped) in 479 aa overlap (7-469:5-480); and SUB0834, 43.788% identity (46.943% ungapped) in 491 aa overlap (7-471:6-489); and SUB1579, 45.473% identity (48.253% ungapped) in 486 aa overlap (3-471:5-479); Belongs to the glycosyl hydrolase 1 family.
  
 
 0.908
SUB0309
Similar to SUB0837, 51.943% identity (53.249% ungapped) in 489 aa overlap (3-484:4-487); and SUB0834, 45.090% identity (47.569% ungapped) in 499 aa overlap (4-485:6-495); and SUB0841, 48.041% identity (49.786% ungapped) in 485 aa overlap (4-485:6-476); and SUB0200, 47.689% identity (49.241% ungapped) in 476 aa overlap (4-477:7-469); and SUB1579, 46.856% identity (49.784% ungapped) in 493 aa overlap (4-484:9-484); and SUB0905, 45.155% identity (47.198% ungapped) in 485 aa overlap (7-485:11-480); Belongs to the glycosyl hydrolase 1 family.
  
 
 0.908
SUB0806
Putative integrase (pseudogene); HMMPfam hit to PF00589, Phage integrase family, score 1.7e-10.
  
 
 0.908
SUB0834
Similar to SUB0837, 52.390% identity (54.906% ungapped) in 502 aa overlap (1-494:1-487); and SUB0841, 49.800% identity (52.866% ungapped) in 500 aa overlap (1-495:1-476); and SUB0309, 44.848% identity (46.541% ungapped) in 495 aa overlap (6-495:4-485); and SUB0905, 46.800% identity (49.893% ungapped) in 500 aa overlap (3-495:5-480); and SUB0200, 43.788% identity (46.943% ungapped) in 491 aa overlap (6-489:7-471); and SUB1579, 47.129% identity (51.073% ungapped) in 505 aa overlap (3-494:6-484); Belongs to the glycosyl hydrolase 1 family.
  
 
 0.908
SUB0837
Similar to SUB0841, 57.290% identity (59.110% ungapped) in 487 aa overlap (2-487:3-475); and SUB0309, 51.844% identity (52.929% ungapped) in 488 aa overlap (4-487:3-484); and SUB0834, 52.390% identity (54.906% ungapped) in 502 aa overlap (1-487:1-494); and SUB1579, 50.820% identity (53.333% ungapped) in 488 aa overlap (5-484:9-481); and SUB0905, 50.103% identity (51.695% ungapped) in 487 aa overlap (3-487:6-479); and SUB0200, 47.390% identity (49.348% ungapped) in 479 aa overlap (5-480:7-469); Belongs to the glycosyl hydrolase 1 family.
  
 
 0.908
SUB0841
Similar to SUB0905, 59.158% identity (59.408% ungapped) in 475 aa overlap (4-476:6-480); and SUB0837, 57.290% identity (59.110% ungapped) in 487 aa overlap (3-475:2-487); and SUB0200, 50.535% identity (50.972% ungapped) in 467 aa overlap (6-470:7-471); and SUB0834, 49.800% identity (52.866% ungapped) in 500 aa overlap (1-476:1-495); and SUB0309, 47.835% identity (49.573% ungapped) in 485 aa overlap (6-476:4-485); and SUB1579, 53.347% identity (55.195% ungapped) in 478 aa overlap (6-472:9-481); Belongs to the glycosyl hydrolase 1 family.
  
 
 0.908
SUB0864
Putative 6-phospho-beta-glucosidase; Belongs to the glycosyl hydrolase 1 family.
  
 
 0.908
Your Current Organism:
Streptococcus uberis
NCBI taxonomy Id: 218495
Other names: S. uberis 0140J, Streptococcus uberis 0140J, Streptococcus uberis str. 0140J
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