Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
SUB1370Putative zinc carboxypeptidase; Possible surface-anchored protein. CDS is orthologous to Streptococcal proteins which have a sortase-processing, cell wall-anchor motif (i.e. LPXTG), however the CDS lacks such a motif. (1074 aa)    
Predicted Functional Partners:
SUB1369
Acetyltransferase (GNAT) family protein.
       0.504
SUB1368
Putative esterase.
     
 0.496
galE
UDP-glucose 4-epimerase (pseudogene); HMMPfam hit to PF01370, NAD dependent epimerase/dehydratase family, score 9e-139.
  
 
 0.483
SUB0207
Putative surface-anchored protein.
      
 0.482
SUB0241
Internal region is similar to Escherichia coli 2',3'-cyclic-nucleotide 2'-phosphodiesterase precursor CpdB UniProt:CN16_ECOLI (EMBL:ECCPDB) (647 aa) fasta scores: E()=5.6e-90, 46.809% id in 611 aa.
     
 0.477
srtA
Sortase A.
  
  
 0.467
SUB1730
Putative surface-anchored protein.
      
 0.466
Your Current Organism:
Streptococcus uberis
NCBI taxonomy Id: 218495
Other names: S. uberis 0140J, Streptococcus uberis 0140J, Streptococcus uberis str. 0140J
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