Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
SUB1378Conserved hypothetical protein. (209 aa)    
Predicted Functional Partners:
hpf
Sigma 54 modulation protein / S30EA ribosomal protein; Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase; 100S ribosomes are translationally inactive and sometimes present during exponential growth.
     
 0.823
cysM
Putative cysteine synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family.
   
   0.762
comFA
Putative late competence protein.
     
 0.758
comFC
Putative late competence protein.
       0.727
SUB1115
Putative membrane protein.
     
 0.529
SUB1473
ABC transporter protein EcsB.
      
 0.528
SUB0966
Putative myo-inositol-1(or 4)-monophosphatase.
      
 0.517
SUB1125
Conserved hypothetical protein.
   
    0.404
Your Current Organism:
Streptococcus uberis
NCBI taxonomy Id: 218495
Other names: S. uberis 0140J, Streptococcus uberis 0140J, Streptococcus uberis str. 0140J
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