Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
SUB1447Haloacid dehalogenase-like hydrolase. (273 aa)    
Predicted Functional Partners:
SUB1251
Conserved hypothetical protein.
  
     0.771
lacG1
6-phospho-beta-galactosidase 1; Similar to SUB0800, 76.559% identity (76.559% ungapped) in 465 aa overlap (2-466:3-467).
       0.527
pepT
Peptidase T; Cleaves the N-terminal amino acid of tripeptides. Belongs to the peptidase M20B family.
  
    0.452
SUB1232
Putative O-methyltransferase.
 
   0.444
copY
Putative negative regulator of copper transport operon.
       0.443
copA
Copper-transporting ATPase.
       0.439
Your Current Organism:
Streptococcus uberis
NCBI taxonomy Id: 218495
Other names: S. uberis 0140J, Streptococcus uberis 0140J, Streptococcus uberis str. 0140J
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