Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
SUB1459Sugar phosphotransferase system (PTS), IIB component. (101 aa)    
Predicted Functional Partners:
SUB1460
Sugar phosphotransferase system (PTS), IIA component.
 
 
 0.997
SUB1458
Sugar phosphotransferase system (PTS), galactitol-specific family, IIC component.
 
 
 0.993
ptsH
Histidine-containing phosphocarrier protein (HPr).
    
 0.905
lacB1
Galactose-6-phosphate isomerase LacB subunit 1; Similar to SUB0794, 77.778% identity (77.778% ungapped) in 171 aa overlap (1-171:1-171).
 
     0.743
lacA1
Galactose-6-phosphate isomerase LacA subunit 1; Similar to SUB0793, 74.286% identity (74.286% ungapped) in 140 aa overlap (1-140:1-140).
 
     0.702
lacR1
Lactose phosphotransferase system repressor 1.
 
   
 0.699
lacD1
Tagatose 1,6-diphosphate aldolase 1; Similar to SUB0040, 97.214% identity (97.214% ungapped) in 323 aa overlap (3-325:4-326); and SUB0796, 75.460% identity (75.692% ungapped) in 326 aa overlap (1-325:1-326); Belongs to the aldolase LacD family.
 
     0.614
agaS
Putative tagatose-6-phosphate aldose/ketose isomerase.
 
   
 0.577
lacX1
Aldose 1-epimerase 1; Similar to SUB0802, 48.986% identity (49.828% ungapped) in 296 aa overlap (3-295:6-299).
  
    0.529
lacB2
Galactose-6-phosphate isomerase LacB subunit 2; Similar to SUB1456, 77.778% identity (77.778% ungapped) in 171 aa overlap (1-171:1-171).
 
     0.517
Your Current Organism:
Streptococcus uberis
NCBI taxonomy Id: 218495
Other names: S. uberis 0140J, Streptococcus uberis 0140J, Streptococcus uberis str. 0140J
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