STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SUB1507Putative N-acetyl-muramidase. (195 aa)    
Predicted Functional Partners:
SUB1508
Putative D-alanyl-D-alanine carboxypeptidase.
     
 0.808
SUB1509
Phosphoglycerate mutase family protein.
       0.800
SUB0752
Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase family protein.
  
     0.747
mur1.1
Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase family protein.
  
     0.741
SUB0377
Conserved hypothetical protein.
  
     0.600
SUB1553
Putative membrane protein.
  
     0.595
hrcA
Heat-inducible transcription repressor HrcA; Negative regulator of class I heat shock genes (grpE-dnaK- dnaJ and groELS operons). Prevents heat-shock induction of these operons.
       0.556
rpoZ
DNA-directed RNA polymerase omega chain; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.
  
     0.538
srtA
Sortase A.
  
   
 0.521
SUB0848
Conserved hypothetical protein.
  
     0.511
Your Current Organism:
Streptococcus uberis
NCBI taxonomy Id: 218495
Other names: S. uberis 0140J, Streptococcus uberis 0140J, Streptococcus uberis str. 0140J
Server load: medium (56%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.