Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
SUB1541RpiR family regulatory protein. (258 aa)    
Predicted Functional Partners:
SUB0904
rpiR-family regulatory protein.
  
   
 0.832
SUB1582
RpiR family regulatory protein.
  
   
 0.828
SUB1650
Putative transcription regulator.
  
     0.765
SUB0807
Putative transcriptional regulator.
  
     0.758
scrA
Putative sucrose-specific phosphotransferase system (PTS), IIABC component.
  
  
 0.601
scrK1
Similar to SUB0308, 69.310% identity (69.310% ungapped) in 290 aa overlap (4-293:1-290).
  
  
 0.553
SUB1540
Sugar phosphotransferase system (PTS), IIC component; The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane.
     
 0.548
nanE
Putative N-acetylmannosamine-6-phosphate 2-epimerase; Converts N-acetylmannosamine-6-phosphate (ManNAc-6-P) to N- acetylglucosamine-6-phosphate (GlcNAc-6-P).
 
   
 0.511
pmi
Mannose-6-phosphate isomerase; Belongs to the mannose-6-phosphate isomerase type 1 family.
  
    0.488
SUB1539
Putative beta-glucosidase; Belongs to the glycosyl hydrolase 1 family.
  
    0.433
Your Current Organism:
Streptococcus uberis
NCBI taxonomy Id: 218495
Other names: S. uberis 0140J, Streptococcus uberis 0140J, Streptococcus uberis str. 0140J
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