STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
scrBPutative sucrose-6-phosphate hydrolase; Enables the bacterium to metabolize sucrose as a sole carbon source; Belongs to the glycosyl hydrolase 32 family. (479 aa)    
Predicted Functional Partners:
scrA
Putative sucrose-specific phosphotransferase system (PTS), IIABC component.
 
 
 0.995
scrK1
Similar to SUB0308, 69.310% identity (69.310% ungapped) in 290 aa overlap (4-293:1-290).
  
 
 0.945
SUB0307
Beta-fructofuranosidase; Enables the bacterium to metabolize sucrose as a sole carbon source; Belongs to the glycosyl hydrolase 32 family.
  
  
 
0.927
scrK2
Similar to SUB1542, 69.310% identity (69.310% ungapped) in 290 aa overlap (1-290:4-293).
  
 
 0.920
scrR
Putative sucrose operon repressor.
 
  
 0.919
SUB1763
Sugar phosphotransferase system (PTS), IIABC component.
 
  
 0.906
SUB0830
Transcription antiterminator (pseudogene); HMMPfam hit to PF00874, PRD domain, score 2.1e-14.
 
  
 0.882
SUB0236
Putative glucose-specific phosphotransferase system (PTS), IIABC component.
 
  
 0.764
SUB1539
Putative beta-glucosidase; Belongs to the glycosyl hydrolase 1 family.
  
 
 0.718
SUB0198
Putative beta-glucosidase; Belongs to the glycosyl hydrolase 1 family.
   
 
 0.666
Your Current Organism:
Streptococcus uberis
NCBI taxonomy Id: 218495
Other names: S. uberis 0140J, Streptococcus uberis 0140J, Streptococcus uberis str. 0140J
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