Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
citXPuatative apo-citrate lyase phosphoribosyl-dephospho-CoA transferase. (185 aa)    
Predicted Functional Partners:
citF
Putative citrate lyase alpha subunit.
 
  
 0.998
citD
Putative citrate lyase beta subunit (pseudogene); Covalent carrier of the coenzyme of citrate lyase.
 
  
 0.958
SUB1584
Putative carboxylase subunit.
     
 0.879
dapA
Dihydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA).
   
    0.846
nanH
Putative N-acetylneuraminate lyase.
   
    0.846
SUB1722
L-ribulose 5-phosphate 4-epimerase.
   
    0.569
malP
Sodium-dependent malate transporter.
 
   
 0.547
srlA
Putative glucitol/sorbitol-specific phosphotransferase system (PTS), IIC2 component.
      
 0.520
SUB0010
Putative septum formation initiator protein.
      
 0.513
gcdB
Putative Na+-transporting glutaconyl-CoA decarboxylase beta subunit; Tunnel subunit of the primary sodium pump glutaconyl-CoA decarboxylase (GCD).
  
  
 0.489
Your Current Organism:
Streptococcus uberis
NCBI taxonomy Id: 218495
Other names: S. uberis 0140J, Streptococcus uberis 0140J, Streptococcus uberis str. 0140J
Server load: medium (52%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.