Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
citDPutative citrate lyase beta subunit (pseudogene); Covalent carrier of the coenzyme of citrate lyase. (101 aa)    
Predicted Functional Partners:
citF
Putative citrate lyase alpha subunit.
 
 
 0.998
citX
Puatative apo-citrate lyase phosphoribosyl-dephospho-CoA transferase.
 
  
 0.958
glpO
Alpha-glycerophosphate oxidase.
   
    0.869
gcdB
Putative Na+-transporting glutaconyl-CoA decarboxylase beta subunit; Tunnel subunit of the primary sodium pump glutaconyl-CoA decarboxylase (GCD).
     
 0.834
SUB1590
Putative membrane protein.
       0.689
SUB1593
Conserved hypothetical protein.
       0.614
SUB1592
Putative decarboxylase gamma chain.
     
 0.556
malP
Sodium-dependent malate transporter.
 
   
 0.538
SUB0825
NAD-dependent malic enzyme.
  
  
 0.536
SUB1801
Putative coenzyme A transferase; Belongs to the 3-oxoacid CoA-transferase family.
  
  
 0.528
Your Current Organism:
Streptococcus uberis
NCBI taxonomy Id: 218495
Other names: S. uberis 0140J, Streptococcus uberis 0140J, Streptococcus uberis str. 0140J
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