STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dppBDi-tripeptide transport system permease protein. (304 aa)    
Predicted Functional Partners:
dppC
Di-tripeptide transporter permease protein.
 
 0.999
dppD
Di-tripeptide transporter ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 0.998
dppF
Di-tripeptide transporter ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 0.997
dppA
Putative peptide binding protein; Q93QH8_9LACT; Similar to SUB0586, 69.853% identity (69.982% ungapped) in 544 aa overlap (9-551:4-547).
 
 0.994
SUB0586
Putative extracellular oligopeptide-binding protein; Similar to SUB1625, 69.853% identity (69.982% ungapped) in 544 aa overlap (4-547:9-551).
 
 0.987
guaA
GMP synthase [glutamine-hydrolyzing]; Catalyzes the synthesis of GMP from XMP.
  
  
 0.509
SUB0312
ABC transporter ATP-binding protein.
  
  
 0.484
SUB0599
Putative membrane protein.
  
  
 0.484
glnA
Putative glutamine synthetase.
     
 0.414
Your Current Organism:
Streptococcus uberis
NCBI taxonomy Id: 218495
Other names: S. uberis 0140J, Streptococcus uberis 0140J, Streptococcus uberis str. 0140J
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.