Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
SUB1654Conserved hypothetical protein; CDS is extended at the C-terminus in comparison to orthologues. (161 aa)    
Predicted Functional Partners:
nanH
Putative N-acetylneuraminate lyase.
 
  
 0.937
SUB1652
ROK family protein.
 
  
 0.870
nanE
Putative N-acetylmannosamine-6-phosphate 2-epimerase; Converts N-acetylmannosamine-6-phosphate (ManNAc-6-P) to N- acetylglucosamine-6-phosphate (GlcNAc-6-P).
 
  
 0.804
SUB1651
Acetyl xylan esterase (AXE1) family protein.
 
     0.798
SUB1655
Extracellular solute-binding lipoprotein.
       0.732
SUB1656
Putative transport system permease.
       0.609
SUB1657
Putative transport system permease.
       0.605
uidA
Putative beta-glucuronidase; Belongs to the glycosyl hydrolase 2 family.
   
 
 0.597
Your Current Organism:
Streptococcus uberis
NCBI taxonomy Id: 218495
Other names: S. uberis 0140J, Streptococcus uberis 0140J, Streptococcus uberis str. 0140J
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