STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SUB1656Putative transport system permease. (278 aa)    
Predicted Functional Partners:
SUB1657
Putative transport system permease.
 
 0.985
msmK
Multiple sugar-binding transport ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 0.957
SUB1655
Extracellular solute-binding lipoprotein.
 
 
 0.953
SUB0163
Binding-protein-dependent transport system membrane protein.
 
 0.936
malC
Putative maltose/maltodextrin ABC transport system permease protein.
 
 
 0.902
SUB0304
Binding-protein-dependent transport system membrane protein.
 
 
 0.865
nanE
Putative N-acetylmannosamine-6-phosphate 2-epimerase; Converts N-acetylmannosamine-6-phosphate (ManNAc-6-P) to N- acetylglucosamine-6-phosphate (GlcNAc-6-P).
  
  
 0.782
SUB0184
Extracellular sugar-binding protein.
 
 
 0.747
SUB0306
Extracellular solute-binding protein.
  
 
 0.707
SUB1654
Conserved hypothetical protein; CDS is extended at the C-terminus in comparison to orthologues.
       0.606
Your Current Organism:
Streptococcus uberis
NCBI taxonomy Id: 218495
Other names: S. uberis 0140J, Streptococcus uberis 0140J, Streptococcus uberis str. 0140J
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