Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
SUB1689ABC transporter ATP-binding membrane protein. (569 aa)    
Predicted Functional Partners:
SUB1688
ABC transporter ATP-binding membrane protein.
 
0.992
SUB1690
MarR family regulatory protein.
  
  
 0.922
pstB3
Phosphate import ATP-binding protein 3; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family.
 
     
0.898
SUB0761
ABC transporter, ATP-binding/permease protein.
 
 
0.706
SUB1301
ABC transporter, ATP-binding/permease protein.
 
 
0.695
SUB1302
ABC transporter, ATP-binding/permease protein.
 
 
0.668
gpsA
Glycerol-3-phosphate dehydrogenase [NAD(P)+]; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.
  
   0.560
hasC
UTP--glucose-1-phosphate uridylyltransferase.
  
  
 0.528
rpsL
30S ribosomal protein S12; With S4 and S5 plays an important role in translational accuracy.
     
 0.512
SUB1104
ABC transporter ATP-binding protein.
  
 
 0.458
Your Current Organism:
Streptococcus uberis
NCBI taxonomy Id: 218495
Other names: S. uberis 0140J, Streptococcus uberis 0140J, Streptococcus uberis str. 0140J
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