Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
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[Homology]
Score
SUB1698Putative peptidase; Catalyzes the conversion of N-acetyl-diaminopimelate to diaminopimelate and acetate. (376 aa)    
Predicted Functional Partners:
dapH
Putative transferase; Catalyzes the transfer of an acetyl group from acetyl-CoA to tetrahydrodipicolinate.
 
  
 0.937
SUB0021
Putative aminotransferase.
 
  
 0.917
pepQ
Putative Xaa-Pro dipeptidase; Belongs to the peptidase M24B family.
     
 0.534
SUB0433
Branched-chain amino acid transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
      
 0.523
dapB
Putative dihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate.
 
   
 0.498
hasA
Hyaluronan synthase.
  
    0.477
SUB1694
5-formyltetrahydrofolate cyclo-ligase family protein; Belongs to the 5-formyltetrahydrofolate cyclo-ligase family.
  
    0.469
SUB1693
Rhomboid family membrane protein.
       0.443
hasB1
UDP-glucose 6-dehydrogenase 1; Similar to SUB1027, 58.293% identity (59.900% ungapped) in 410 aa overlap (2-401:3-411).
       0.419
srlB
Putative glucitol/sorbitol-specific phosphotransferase system (PTS), IIA component.
       0.416
Your Current Organism:
Streptococcus uberis
NCBI taxonomy Id: 218495
Other names: S. uberis 0140J, Streptococcus uberis 0140J, Streptococcus uberis str. 0140J
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