Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
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[Homology]
Score
srlAPutative glucitol/sorbitol-specific phosphotransferase system (PTS), IIC2 component. (182 aa)    
Predicted Functional Partners:
srlB
Putative glucitol/sorbitol-specific phosphotransferase system (PTS), IIA component.
 
 
 0.999
srlE
Putative glucitol/sorbitol-specific phosphotransferase system (PTS), IIBC component.
 
 0.999
sorD
Sorbitol-6-phosphate 2-dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
 
 0.997
gutM
Glucitol operon activator protein.
 
  
 0.980
SUB1704
Transcription antiterminator.
 
  
 0.980
ptsH
Histidine-containing phosphocarrier protein (HPr).
    
  0.905
pgi
Glucose-6-phosphate isomerase; Belongs to the GPI family.
       0.599
citX
Puatative apo-citrate lyase phosphoribosyl-dephospho-CoA transferase.
      
 0.520
SUB0010
Putative septum formation initiator protein.
      
 0.513
dapH
Putative transferase; Catalyzes the transfer of an acetyl group from acetyl-CoA to tetrahydrodipicolinate.
       0.466
Your Current Organism:
Streptococcus uberis
NCBI taxonomy Id: 218495
Other names: S. uberis 0140J, Streptococcus uberis 0140J, Streptococcus uberis str. 0140J
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