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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
srlAPutative glucitol/sorbitol-specific phosphotransferase system (PTS), IIC2 component. (182 aa)    
Predicted Functional Partners:
srlB
Putative glucitol/sorbitol-specific phosphotransferase system (PTS), IIA component.
 
 
 0.998
srlE
Putative glucitol/sorbitol-specific phosphotransferase system (PTS), IIBC component.
 
 
 0.997
sorD
Sorbitol-6-phosphate 2-dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
 
  0.996
gutM
Glucitol operon activator protein.
 
  
 0.988
SUB1704
Transcription antiterminator.
 
  
 0.970
ptsH
Histidine-containing phosphocarrier protein (HPr).
    
 0.907
SUB0194
Transcriptional regulator (antiterminator).
 
  
 0.547
SUB0530
Transcriptional regulator (antiterminator).
 
  
 0.547
SUB1761
Putative PTS multi-domain regulator.
  
  
 0.483
pgi
Glucose-6-phosphate isomerase; Belongs to the GPI family.
       0.479
Your Current Organism:
Streptococcus uberis
NCBI taxonomy Id: 218495
Other names: S. uberis 0140J, Streptococcus uberis 0140J, Streptococcus uberis str. 0140J
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