Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
SUB1704Transcription antiterminator. (623 aa)    
Predicted Functional Partners:
srlA
Putative glucitol/sorbitol-specific phosphotransferase system (PTS), IIC2 component.
 
  
 0.980
gutM
Glucitol operon activator protein.
 
  
 0.965
sorD
Sorbitol-6-phosphate 2-dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
  
 0.962
srlE
Putative glucitol/sorbitol-specific phosphotransferase system (PTS), IIBC component.
 
    0.956
srlB
Putative glucitol/sorbitol-specific phosphotransferase system (PTS), IIA component.
 
  
 0.946
fruA-2
Putative fructose-specific phosphotransferase system (PTS), IIABC component.
  
  
 0.906
SUB1763
Sugar phosphotransferase system (PTS), IIABC component.
 
 
 0.824
SUB0236
Putative glucose-specific phosphotransferase system (PTS), IIABC component.
  
 
 0.798
SUB0830
Transcription antiterminator (pseudogene); HMMPfam hit to PF00874, PRD domain, score 2.1e-14.
  
 
 0.798
scrA
Putative sucrose-specific phosphotransferase system (PTS), IIABC component.
  
 
 0.798
Your Current Organism:
Streptococcus uberis
NCBI taxonomy Id: 218495
Other names: S. uberis 0140J, Streptococcus uberis 0140J, Streptococcus uberis str. 0140J
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