Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
SUB1720Conserved hypothetical protein. (363 aa)    
Predicted Functional Partners:
SUB1727
Putative sugar-specific permease, SgaT/UlaA family.
 
 
 0.991
SUB1724
Putative hexulose-6-phosphate synthase.
 
  
 0.989
SUB1726
Sugar phosphotransferase system (PTS), lactose/cellobiose-specific family, IIB component.
 
 
 0.984
SUB1725
Sugar phosphotransferase system (PTS), IIA component.
 
  
  0.964
SUB1759
Putative sugar-specific permease, SgaT/UlaA family.
 
 
 0.961
SUB1761
Putative PTS multi-domain regulator.
 
  
 0.919
SUB1760
Sugar phosphotransferase system (PTS), lactose/cellobiose-specific family, IIB component.
  
 
 0.911
SUB1723
Putative hexulose-6-phosphate isomerase.
 
   
 0.897
SUB1722
L-ribulose 5-phosphate 4-epimerase.
 
   
 0.712
SUB1721
Putative transcriptional antiterminator; Possible alternate translational start site after codon 1.
       0.670
Your Current Organism:
Streptococcus uberis
NCBI taxonomy Id: 218495
Other names: S. uberis 0140J, Streptococcus uberis 0140J, Streptococcus uberis str. 0140J
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