Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SUB1748Putative dioxygenase. (320 aa)    
Predicted Functional Partners:
SUB1751
Putative phospholipase/carboxylesterase.
  
 0.985
SUB1750
Conserved hypothetical protein.
 
  
 0.900
SUB1749
Putative dioxygenase.
 
  
0.851
SUB1766
Glyoxalase/bleomycin resistance protein/dioxygenase superfamily protein.
 
  
 0.709
SUB1747
Putative membrane protein.
  
    0.519
SUB1746
Conserved hypothetical protein; Possible alternative translational start sites.
       0.497
SUB0527
Nitroreductase family protein.
  
  
 0.432
SUB1055
Nitroreductase family protein.
  
  
 0.432
birA
BirA bifunctional protein [includes: biotin operon repressor; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family.
  
    0.418
SUB0908
NADPH-dependent FMN reductase; C-terminus is similar to the C-terminal region of Shewanella oneidensis fumarate reductase flavoprotein subunit precursor UniProt:FRDA_SHEON (EMBL:AE015541) (596 aa) fasta scores: E()=7.7e-27, 34.972% id in 529 aa. N-terminus is similar to SUB1685, 50.794% identity (51.064% ungapped) in 189 aa overlap (1-189:1-188); and the N-terminal region of SUB1686, 50.877% identity (51.786% ungapped) in 228 aa overlap (1-224:1-228).
  
 
 0.414
Your Current Organism:
Streptococcus uberis
NCBI taxonomy Id: 218495
Other names: S. uberis 0140J, Streptococcus uberis 0140J, Streptococcus uberis str. 0140J
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.