STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SUB1834Hypothetical phage protein; Similar to SUB0224, 74.138% identity (74.138% ungapped) in 58 aa overlap (1-58:1-58). (60 aa)    
Predicted Functional Partners:
SUB1832A
Putative phage membrane protein; Similar to SUB0223, 82.540% identity (82.540% ungapped) in 63 aa overlap (1-63:1-63).
       0.773
SUB1835
Hypothetical phage protein.
       0.773
SUB1831
Putative DNA-binding phage protein; Similar to SUB0222, 85.393% identity (85.393% ungapped) in 89 aa overlap (1-89:1-89).
       0.768
SUB1832
Putative DNA-binding phage protein.
       0.768
SUB1830
Hypothetical phage protein.
       0.621
SUB1829
Hypothetical phage protein.
       0.557
SUB1827
Hypothetical phage protein.
       0.421
SUB1828
Hypothetical phage protein.
       0.421
SUB1836
Hypothetical phage protein; Similar to SUB0227, 75.000% identity (75.000% ungapped) in 96 aa overlap (1-96:1-96).
       0.408
Your Current Organism:
Streptococcus uberis
NCBI taxonomy Id: 218495
Other names: S. uberis 0140J, Streptococcus uberis 0140J, Streptococcus uberis str. 0140J
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.