STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SUB1851Putative transglycosylase protein. (216 aa)    
Predicted Functional Partners:
SUB0888
Conserved hypothetical protein (fragment); PS00014 Endoplasmic reticulum targeting sequence.
  
  
 0.857
SUB1856
Putative membrane protein.
 
 
   0.819
SUB0598
Glycosyl hydrolases family protein.
 
   
 0.732
SUB1241
Putative lipoprotein.
  
     0.725
SUB0150
Conserved hypothetical protein.
  
     0.647
SUB1424
Putative membrane protein.
  
     0.620
SUB0048
Putative amidase.
  
   
 0.607
SUB1737
Putative exported protein.
  
   
 0.586
SUB1212
Putative lipoprotein.
  
     0.569
SUB1122
FAD dependent oxidoreductase.
  
     0.564
Your Current Organism:
Streptococcus uberis
NCBI taxonomy Id: 218495
Other names: S. uberis 0140J, Streptococcus uberis 0140J, Streptococcus uberis str. 0140J
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.