Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SUB0165 | pgsA | SUB0165 | SUB1855 | Putative fusion protein (pseudogene); PS00343 Gram-positive cocci surface proteins 'anchoring' hexapeptide. | Putative CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. | 0.658 |
SUB0253 | pgsA | SUB0253 | SUB1855 | Putative phosphatidate cytidylyltransferase; Belongs to the CDS family. | Putative CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. | 0.942 |
SUB0974 | cinA | SUB0974 | SUB1779 | ABC transporter permease protein. | CinA-like protein; Belongs to the CinA family. | 0.617 |
SUB0974 | pgsA | SUB0974 | SUB1855 | ABC transporter permease protein. | Putative CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. | 0.648 |
SUB1856 | SUB1857 | SUB1856 | SUB1857 | Putative membrane protein. | Putative protease. | 0.663 |
SUB1856 | SUB1858 | SUB1856 | SUB1858 | Putative membrane protein. | Conserved hypothetical protein. | 0.663 |
SUB1856 | cinA | SUB1856 | SUB1779 | Putative membrane protein. | CinA-like protein; Belongs to the CinA family. | 0.569 |
SUB1856 | ecfA | SUB1856 | SUB1853 | Putative membrane protein. | ABC transporter ATP-binding protein; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. | 0.800 |
SUB1856 | ecfA-2 | SUB1856 | SUB1854 | Putative membrane protein. | ABC transporter ATP-binding protein; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. | 0.800 |
SUB1856 | ecfT | SUB1856 | SUB1852 | Putative membrane protein. | Putative cobalt transport protein; Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. | 0.800 |
SUB1856 | pgsA | SUB1856 | SUB1855 | Putative membrane protein. | Putative CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. | 0.920 |
SUB1857 | SUB1856 | SUB1857 | SUB1856 | Putative protease. | Putative membrane protein. | 0.663 |
SUB1857 | SUB1858 | SUB1857 | SUB1858 | Putative protease. | Conserved hypothetical protein. | 0.978 |
SUB1857 | ecfA | SUB1857 | SUB1853 | Putative protease. | ABC transporter ATP-binding protein; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. | 0.663 |
SUB1857 | ecfA-2 | SUB1857 | SUB1854 | Putative protease. | ABC transporter ATP-binding protein; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. | 0.663 |
SUB1857 | ecfT | SUB1857 | SUB1852 | Putative protease. | Putative cobalt transport protein; Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. | 0.663 |
SUB1857 | pgsA | SUB1857 | SUB1855 | Putative protease. | Putative CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. | 0.683 |
SUB1858 | SUB1856 | SUB1858 | SUB1856 | Conserved hypothetical protein. | Putative membrane protein. | 0.663 |
SUB1858 | SUB1857 | SUB1858 | SUB1857 | Conserved hypothetical protein. | Putative protease. | 0.978 |
SUB1858 | cinA | SUB1858 | SUB1779 | Conserved hypothetical protein. | CinA-like protein; Belongs to the CinA family. | 0.415 |
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