Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
SUB1866Putative membrane protein. (856 aa)    
Predicted Functional Partners:
SUB1865
ABC transporter, ATP-binding protein.
     
 0.745
SUB0117
Conserved hypothetical protein.
  
     0.688
SUB0848
Conserved hypothetical protein.
  
     0.686
SUB1864
Putative membrane protein.
       0.660
SUB0876
Putative membrane protein; Similar to Pneumococcal vaccine antigen A protein.
  
     0.629
SUB0598
Glycosyl hydrolases family protein.
  
     0.596
trsA
tryptophanyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
       0.539
ezrA
Septation ring formation regulator; Negative regulator of FtsZ ring formation; modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization; Belongs to the EzrA family.
  
     0.538
SUB1553
Putative membrane protein.
  
     0.538
csbB
Putative glucosyl transferase; Similar to SUB0703, 66.450% identity (66.450% ungapped) in 307 aa overlap (1-307:2-308).
 
  
 0.525
Your Current Organism:
Streptococcus uberis
NCBI taxonomy Id: 218495
Other names: S. uberis 0140J, Streptococcus uberis 0140J, Streptococcus uberis str. 0140J
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