STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDF00062.1Threonine/homoserine/homoserine lactone efflux protein. (208 aa)    
Predicted Functional Partners:
SDG28606.1
Threonine/homoserine/homoserine lactone efflux protein.
  
    0.683
SDE99983.1
3-(3-hydroxy-phenyl)propionate hydroxylase.
       0.547
SDF00026.1
Protein of unknown function.
       0.547
SDE99906.1
Glyoxylase, beta-lactamase superfamily II.
       0.514
SDE99946.1
Hypothetical protein.
       0.514
SDF00099.1
Peptide/nickel transport system substrate-binding protein.
       0.419
SDE99869.1
Fumarylacetoacetate hydrolase.
       0.413
Your Current Organism:
Sulfitobacter delicatus
NCBI taxonomy Id: 218672
Other names: ATCC BAA-321, DSM 16477, KMM 3584, LMG 20554, LMG:20554, S. delicatus, Sulfitobacter delicae, Sulfitobacter delicatus Ivanova et al. 2004, Sulfitobacter deliciae
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.