STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDF00938.1Cytochrome c. (166 aa)    
Predicted Functional Partners:
SDF85147.1
Sulfur dehydrogenase subunit SoxC.
   
 0.926
SDG87436.1
Cytochrome c oxidase cbb3-type subunit 2.
  
 0.878
SDG87387.1
Cytochrome c oxidase cbb3-type subunit 1; Belongs to the heme-copper respiratory oxidase family.
  
 0.870
SDF79355.1
Sarcosine oxidase subunit alpha; Belongs to the GcvT family.
   
 0.840
SDF75577.1
Sarcosine oxidase subunit alpha; Belongs to the GcvT family.
   
 0.840
SDH08021.1
Sulfite reductase (NADPH) flavoprotein alpha-component.
    
  0.810
SDF23217.1
Ubiquinol-cytochrome c reductase cytochrome c1 subunit.
 
 
 0.791
SDF23135.1
Ubiquinol-cytochrome c reductase iron-sulfur subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
 
  
 0.786
SDG75402.1
Ubiquinol-cytochrome c reductase iron-sulfur subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
 
  
 0.781
SDG72322.1
Cytochrome c oxidase subunit I+III; Belongs to the heme-copper respiratory oxidase family.
    
 0.755
Your Current Organism:
Sulfitobacter delicatus
NCBI taxonomy Id: 218672
Other names: ATCC BAA-321, DSM 16477, KMM 3584, LMG 20554, LMG:20554, S. delicatus, Sulfitobacter delicae, Sulfitobacter delicatus Ivanova et al. 2004, Sulfitobacter deliciae
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.