STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDF03659.1Conserved hypothetical protein. (147 aa)    
Predicted Functional Partners:
SDG27676.1
Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide.
  
    0.827
SDF78714.1
Osmoprotectant transport system substrate-binding protein.
  
    0.798
SDG72721.1
Bacterioferritin; Iron-storage protein, whose ferroxidase center binds Fe(2+) ions, oxidizes them by dioxygen to Fe(3+), and participates in the subsequent Fe(3+) oxide mineral core formation within the central cavity of the protein complex; Belongs to the bacterioferritin family.
   
  
 0.727
SDG23325.1
rsbT co-antagonist protein RsbR.
  
    0.677
SDG23371.1
rsbT antagonist protein RsbS.
  
    0.671
SDF85179.1
Sulfur dehydrogenase subunit SoxD.
   
 
 0.658
SDG05889.1
STAS domain-containing protein.
   
    0.621
SDG67370.1
Anti-sigma B factor antagonist; Belongs to the anti-sigma-factor antagonist family.
   
    0.621
SDF19886.1
Cytochrome c.
    
 
 0.606
SDG76078.1
Cytochrome c.
    
 
 0.606
Your Current Organism:
Sulfitobacter delicatus
NCBI taxonomy Id: 218672
Other names: ATCC BAA-321, DSM 16477, KMM 3584, LMG 20554, LMG:20554, S. delicatus, Sulfitobacter delicae, Sulfitobacter delicatus Ivanova et al. 2004, Sulfitobacter deliciae
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.