STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDF10822.1PAS domain S-box-containing protein. (1071 aa)    
Predicted Functional Partners:
SDF10900.1
Response regulator receiver domain-containing protein.
 
 
  0.887
SDF78681.1
PAS domain S-box-containing protein.
 
 0.849
SDG87240.1
PAS/PAC sensor hybrid histidine kinase.
 
 0.844
SDG59018.1
PAS domain S-box-containing protein.
 
 
0.803
SDF10978.1
Response regulator receiver domain-containing protein.
  
 
  0.801
SDF73242.1
Response regulator receiver domain-containing protein.
  
 
  0.796
SDG91281.1
Response regulator receiver domain-containing protein.
  
 
  0.793
SDF07223.1
Hypothetical protein.
 
0.789
SDH04438.1
Response regulator receiver domain-containing protein.
  
 
  0.787
SDG05943.1
Two-component system, chemotaxis family, sensor kinase CheA.
 
 0.776
Your Current Organism:
Sulfitobacter delicatus
NCBI taxonomy Id: 218672
Other names: ATCC BAA-321, DSM 16477, KMM 3584, LMG 20554, LMG:20554, S. delicatus, Sulfitobacter delicae, Sulfitobacter delicatus Ivanova et al. 2004, Sulfitobacter deliciae
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.