STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDF21245.1Peptide/nickel transport system permease protein. (315 aa)    
Predicted Functional Partners:
SDF21280.1
Peptide/nickel transport system permease protein.
 
 0.995
SDF21318.1
Peptide/nickel transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 
  0.938
SDF11952.1
Peptide/nickel transport system permease protein.
 
 
 0.887
SDF21164.1
Peptide/nickel transport system substrate-binding protein.
 
  0.885
SDF12044.1
Peptide/nickel transport system substrate-binding protein.
 
  0.882
SDG29115.1
Peptide/nickel transport system permease protein.
 
 
 0.871
SDG32975.1
Peptide/nickel transport system permease protein.
 
 
 0.869
SDG38306.1
Peptide/nickel transport system permease protein.
 
 
 0.859
SDF42609.1
Peptide/nickel transport system permease protein.
 
 
 0.853
SDG27167.1
Peptide/nickel transport system permease protein.
 
 
 0.846
Your Current Organism:
Sulfitobacter delicatus
NCBI taxonomy Id: 218672
Other names: ATCC BAA-321, DSM 16477, KMM 3584, LMG 20554, LMG:20554, S. delicatus, Sulfitobacter delicae, Sulfitobacter delicatus Ivanova et al. 2004, Sulfitobacter deliciae
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.