Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDE98170.1 | SDE98205.1 | SAMN04489759_10175 | SAMN04489759_10176 | SH3 domain-containing protein. | NADP-dependent 3-hydroxy acid dehydrogenase YdfG; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.596 |
SDE98170.1 | SDF15426.1 | SAMN04489759_10175 | SAMN04489759_101467 | SH3 domain-containing protein. | Hypothetical protein. | 0.627 |
SDE98170.1 | SDF37644.1 | SAMN04489759_10175 | SAMN04489759_10252 | SH3 domain-containing protein. | Cro/C1-type HTH DNA-binding domain-containing protein. | 0.634 |
SDE98170.1 | SDF60050.1 | SAMN04489759_10175 | SAMN04489759_102535 | SH3 domain-containing protein. | Hypothetical protein. | 0.620 |
SDE98170.1 | SDF99366.1 | SAMN04489759_10175 | SAMN04489759_104103 | SH3 domain-containing protein. | Acetyltransferase (GNAT) family protein. | 0.621 |
SDE98170.1 | SDG88472.1 | SAMN04489759_10175 | SAMN04489759_11381 | SH3 domain-containing protein. | Hypothetical protein. | 0.645 |
SDE98170.1 | deoD | SAMN04489759_10175 | SAMN04489759_10897 | SH3 domain-containing protein. | Purine-nucleoside phosphorylase. | 0.617 |
SDE98170.1 | guaA | SAMN04489759_10175 | SAMN04489759_105141 | SH3 domain-containing protein. | GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP. | 0.794 |
SDE98170.1 | guaB | SAMN04489759_10175 | SAMN04489759_10534 | SH3 domain-containing protein. | Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | 0.764 |
SDE98170.1 | mtnP | SAMN04489759_10175 | SAMN04489759_102482 | SH3 domain-containing protein. | Methylthioadenosine phosphorylase; Catalyzes the reversible phosphorylation of S-methyl-5'- thioadenosine (MTA) to adenine and 5-methylthioribose-1-phosphate. Involved in the breakdown of MTA, a major by-product of polyamine biosynthesis. Responsible for the first step in the methionine salvage pathway after MTA has been generated from S-adenosylmethionine. Has broad substrate specificity with 6-aminopurine nucleosides as preferred substrates; Belongs to the PNP/MTAP phosphorylase family. MTAP subfamily. | 0.577 |
SDE98205.1 | SDE98170.1 | SAMN04489759_10176 | SAMN04489759_10175 | NADP-dependent 3-hydroxy acid dehydrogenase YdfG; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | SH3 domain-containing protein. | 0.596 |
SDE98205.1 | guaB | SAMN04489759_10176 | SAMN04489759_10534 | NADP-dependent 3-hydroxy acid dehydrogenase YdfG; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | 0.450 |
SDF15426.1 | SDE98170.1 | SAMN04489759_101467 | SAMN04489759_10175 | Hypothetical protein. | SH3 domain-containing protein. | 0.627 |
SDF15426.1 | SDF60050.1 | SAMN04489759_101467 | SAMN04489759_102535 | Hypothetical protein. | Hypothetical protein. | 0.517 |
SDF15426.1 | SDG88472.1 | SAMN04489759_101467 | SAMN04489759_11381 | Hypothetical protein. | Hypothetical protein. | 0.516 |
SDF37644.1 | SDE98170.1 | SAMN04489759_10252 | SAMN04489759_10175 | Cro/C1-type HTH DNA-binding domain-containing protein. | SH3 domain-containing protein. | 0.634 |
SDF37644.1 | SDF99366.1 | SAMN04489759_10252 | SAMN04489759_104103 | Cro/C1-type HTH DNA-binding domain-containing protein. | Acetyltransferase (GNAT) family protein. | 0.673 |
SDF60050.1 | SDE98170.1 | SAMN04489759_102535 | SAMN04489759_10175 | Hypothetical protein. | SH3 domain-containing protein. | 0.620 |
SDF60050.1 | SDF15426.1 | SAMN04489759_102535 | SAMN04489759_101467 | Hypothetical protein. | Hypothetical protein. | 0.517 |
SDF60050.1 | SDF99366.1 | SAMN04489759_102535 | SAMN04489759_104103 | Hypothetical protein. | Acetyltransferase (GNAT) family protein. | 0.448 |
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